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SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |
java.lang.Objectjava.awt.Component
java.awt.Container
java.awt.Panel
java.applet.Applet
javax.swing.JApplet
org.compbio.bioverse.viewer.ViewerApplet
Nested Class Summary |
Nested classes inherited from class javax.swing.JApplet |
javax.swing.JApplet.AccessibleJApplet |
Nested classes inherited from class java.applet.Applet |
java.applet.Applet.AccessibleApplet |
Nested classes inherited from class java.awt.Panel |
java.awt.Panel.AccessibleAWTPanel |
Nested classes inherited from class java.awt.Container |
java.awt.Container.AccessibleAWTContainer |
Nested classes inherited from class java.awt.Component |
java.awt.Component.AccessibleAWTComponent, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy |
Field Summary | |
java.awt.Checkbox |
hide_relax
|
static ViewerApplet |
selfRef
|
Fields inherited from class javax.swing.JApplet |
accessibleContext, rootPane, rootPaneCheckingEnabled |
Fields inherited from class java.awt.Component |
BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT |
Fields inherited from interface java.awt.image.ImageObserver |
ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH |
Constructor Summary | |
ViewerApplet()
CONSTRUCTOR |
|
ViewerApplet(java.util.ArrayList intList)
overload contructor to allow data to be PUSHED into the viewer from Action class |
Method Summary | |
void |
actionPerformed(java.awt.event.ActionEvent e)
ActionListener implementation method |
void |
addSortedGoCatsToMenu()
add sorted GO cats to menu bar |
void |
clearScreen()
clear screen method |
void |
destroy()
destroy panel |
void |
getFunctionKeysFromHtml()
data read in at init() |
void |
getFunctionListFromHtml()
data read in at init() |
void |
getInteractionsFromHtml()
for init() data read in |
void |
init()
init() method |
void |
itemStateChanged(java.awt.event.ItemEvent e)
itemListener implementation |
void |
keyPressed(java.awt.event.KeyEvent e)
KeyListener implementation - for search field |
void |
keyReleased(java.awt.event.KeyEvent e)
keyListener implement |
void |
keyTyped(java.awt.event.KeyEvent e)
keyListener |
void |
mouseClicked(java.awt.event.MouseEvent e)
handle right button mouse events separates for getting more detail on the protein node |
void |
mouseEntered(java.awt.event.MouseEvent e)
|
void |
mouseExited(java.awt.event.MouseEvent e)
|
void |
mousePressed(java.awt.event.MouseEvent e)
|
void |
mouseReleased(java.awt.event.MouseEvent e)
|
int |
popPartitionIt(int left,
int right,
int pivot)
for quicksorting |
void |
popQuickSort(int left,
int right)
for quicksorting |
void |
setTableSelectedNodes(java.util.ArrayList tableSelect)
for external calling from tableapplet - turn on table selected members on viewer |
void |
showSelectedNodes(java.lang.String gechoiced)
MENU FUNCTIONALITY - get members of a given GO class |
void |
start()
applet |
void |
stop()
applet |
void |
swap(int dex1,
int dex2)
for quicksorting |
Methods inherited from class javax.swing.JApplet |
addImpl, createRootPane, getAccessibleContext, getContentPane, getGlassPane, getJMenuBar, getLayeredPane, getRootPane, isRootPaneCheckingEnabled, paramString, remove, setContentPane, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, update |
Methods inherited from class java.applet.Applet |
getAppletContext, getAppletInfo, getAudioClip, getAudioClip, getCodeBase, getDocumentBase, getImage, getImage, getLocale, getParameter, getParameterInfo, isActive, newAudioClip, play, play, resize, resize, setStub, showStatus |
Methods inherited from class java.awt.Panel |
addNotify |
Methods inherited from class java.awt.Container |
add, add, add, add, add, addContainerListener, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getInsets, getLayout, getListeners, getMaximumSize, getMinimumSize, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paint, paintComponents, preferredSize, print, printComponents, processContainerEvent, processEvent, remove, removeAll, removeContainerListener, removeNotify, setFocusCycleRoot, setFocusTraversalKeys, setFocusTraversalPolicy, setFont, transferFocusBackward, transferFocusDownCycle, validate, validateTree |
Methods inherited from class java.awt.Component |
action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphics, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getToolkit, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, hide, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isOpaque, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, repaint, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, reshape, setBackground, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setLocation, setLocation, setName, setSize, setSize, setVisible, show, show, size, toString, transferFocus, transferFocusUpCycle |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Field Detail |
public static ViewerApplet selfRef
public java.awt.Checkbox hide_relax
Constructor Detail |
public ViewerApplet()
public ViewerApplet(java.util.ArrayList intList)
intList
- Method Detail |
public void init()
public void getInteractionsFromHtml()
public void getFunctionKeysFromHtml()
public void getFunctionListFromHtml()
public void addSortedGoCatsToMenu()
public void actionPerformed(java.awt.event.ActionEvent e)
actionPerformed
in interface java.awt.event.ActionListener
public void clearScreen()
public void destroy()
public void itemStateChanged(java.awt.event.ItemEvent e)
itemStateChanged
in interface java.awt.event.ItemListener
public void keyPressed(java.awt.event.KeyEvent e)
keyPressed
in interface java.awt.event.KeyListener
public void keyReleased(java.awt.event.KeyEvent e)
keyReleased
in interface java.awt.event.KeyListener
public void keyTyped(java.awt.event.KeyEvent e)
keyTyped
in interface java.awt.event.KeyListener
public void mouseClicked(java.awt.event.MouseEvent e)
mouseClicked
in interface java.awt.event.MouseListener
public void mouseEntered(java.awt.event.MouseEvent e)
mouseEntered
in interface java.awt.event.MouseListener
public void mouseExited(java.awt.event.MouseEvent e)
mouseExited
in interface java.awt.event.MouseListener
public void mousePressed(java.awt.event.MouseEvent e)
mousePressed
in interface java.awt.event.MouseListener
public void mouseReleased(java.awt.event.MouseEvent e)
mouseReleased
in interface java.awt.event.MouseListener
public int popPartitionIt(int left, int right, int pivot)
left
- right
- pivot
-
public void popQuickSort(int left, int right)
left
- right
- public void swap(int dex1, int dex2)
dex1
- dex2
- public void setTableSelectedNodes(java.util.ArrayList tableSelect)
tableSelect
- public void showSelectedNodes(java.lang.String gechoiced)
gechoiced
- public void start()
public void stop()
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